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Update cheatsheets

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ivuorinen
2025-10-23 00:19:46 +00:00
parent 0cc7cfe867
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tldr/linux/blastn
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@@ -18,7 +18,7 @@ source: https://github.com/tldr-pages/tldr.git
- Align two or more sequences, custom tabular output format, output to file:
`blastn -query {{query.fa}} -subject {{subject.fa}} -outfmt {{'6 qseqid qlen qstart qend sseqid slen sstart send bitscore evalue pident'}} -out {{output.tsv}}`
`blastn -query {{query.fa}} -subject {{subject.fa}} -outfmt '{{6 qseqid qlen qstart qend sseqid slen sstart send bitscore evalue pident}}' -out {{output.tsv}}`
- Search nucleotide databases using a nucleotide query, 16 threads (CPUs) to use in the BLAST search, with a maximum number of 10 aligned sequences to keep: