Move pages under tldr, lint run.sh, update docs

tldr/linux/treetime

@@ -0,0 +1,25 @@
+---
+syntax: markdown
+tags: [tldr, linux]
+source: https://github.com/tldr-pages/tldr.git
+---
+# treetime
+
+> TreeTime provides routines for ancestral sequence reconstruction and inference of molecular-clock phylogenies.
+> More information: <https://treetime.readthedocs.io/en/latest/tutorials.html>.
+
+- Infer ancestral sequences maximizing the joint or marginal likelihood:
+
+`treetime ancestral`
+
+- Analyze patterns of recurrent mutations aka homoplasies:
+
+`treetime homoplasy`
+
+- Estimate molecular clock parameters and reroot the tree:
+
+`treetime clock`
+
+- Map discrete character such as host or country to the tree:
+
+`treetime mugration`